Package: gamma 1.1.0
gamma: Dose Rate Estimation from in-Situ Gamma-Ray Spectrometry Measurements
Process in-situ Gamma-Ray Spectrometry for Luminescence Dating. This package allows to import, inspect and correct the energy shifts of gamma-ray spectra. It provides methods for estimating the gamma dose rate by the use of a calibration curve as described in Mercier and Falguères (2007). The package only supports Canberra CNF and TKA and Kromek SPE files.
Authors:
gamma_1.1.0.tar.gz
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gamma.pdf |gamma.html✨
gamma/json (API)
NEWS
# Install 'gamma' in R: |
install.packages('gamma', repos = c('https://crp2a.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/crp2a/gamma/issues
Pkgdown site:https://crp2a.github.io
- AIX_NaI_1 - CEREGE Calibration Curve
- BDX_LaBr_1 - CRP2A Calibration Curve
- clermont - Clermont Reference Data
- clermont_2024 - Clermont Reference Data 2024
archaeometrygamma-spectrometrygeochronologyluminescence-dating
Last updated 3 months agofrom:3d28294dc5 (on v1.1.0). Checks:OK: 3 NOTE: 4. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Dec 23 2024 |
R-4.5-win | OK | Dec 23 2024 |
R-4.5-linux | OK | Dec 23 2024 |
R-4.4-win | NOTE | Dec 23 2024 |
R-4.4-mac | NOTE | Dec 23 2024 |
R-4.3-win | NOTE | Dec 23 2024 |
R-4.3-mac | NOTE | Dec 23 2024 |
Exports:Arithbaseline_linearbaseline_rubberbandbaseline_snipComparedose_fitdose_predictenergy_calibrateget_channelsget_countsget_energyget_energy_calibrationget_hashget_livetimeget_methodget_namesget_ratesget_realtimeget_residualshas_calibrationhas_energyLogicMathMath2peaks_findpeaks_searchplotrange_channelsrange_energyreadset_energy_calibration<-set_energy<-set_method<-set_names<-signal_baselinesignal_correctsignal_integratesignal_slicesignal_smoothsignal_splitsignal_stabilizesmooth_rectangularsmooth_savitzkysmooth_triangularsummariseSummary
Dependencies:BHclicolorspacefansifarverggplot2gluegtableisobandIsoplotRlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerRcpprlangrxylibscalestibbleutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
Help page | Topics |
---|---|
CEREGE Calibration Curve (NaI) | AIX_NaI_1 |
Baseline Estimation and Removal | baseline baseline-method baseline_linear baseline_linear,GammaSpectra-method baseline_linear,GammaSpectrum-method baseline_linear-method baseline_rubberband baseline_rubberband,GammaSpectra-method baseline_rubberband,GammaSpectrum-method baseline_rubberband-method baseline_snip baseline_snip,GammaSpectra-method baseline_snip,GammaSpectrum-method baseline_snip-method signal_baseline signal_baseline,GammaSpectra-method signal_baseline,GammaSpectrum-method signal_correct signal_correct,GammaSpectra-method signal_correct,GammaSpectrum-method signal_correct-method |
An S4 Class to Represent a Spectrum Baseline | .Baseline BaseLine-class Baseline-class |
CRP2A Calibration Curve (LaBr) | BDX_LaBr_1 |
An S4 class to Represent a Dose Rate Calibration Curve | .CalibrationCurve .DoseRateModel CalibrationCurve-class DoseRateModel-class |
Clermont Reference Data | clermont |
Clermont Reference Data 2024 | clermont_2024 |
Coerce | as.matrix.GammaSpectrum coerce |
Dose Rate Estimation | doserate dose_fit dose_fit,GammaSpectra,data.frame-method dose_fit,GammaSpectra,GammaSpectrum,matrix-method dose_fit,GammaSpectra,GammaSpectrumOrNumeric,data.frame-method dose_fit,GammaSpectra,GammaSpectrumOrNumeric,matrix-method dose_fit-method dose_predict dose_predict,CalibrationCurve,GammaSpectra-method dose_predict,CalibrationCurve,GammaSpectrum-method dose_predict,CalibrationCurve,missing-method dose_predict-method |
Energy Scale Calibration | energy energy_calibrate energy_calibrate,GammaSpectra,CalibrationCurve-method energy_calibrate,GammaSpectra,GammaSpectrum-method energy_calibrate,GammaSpectra,list-method energy_calibrate,GammaSpectra,lm-method energy_calibrate,GammaSpectra,PeakPosition-method energy_calibrate,GammaSpectrum,CalibrationCurve-method energy_calibrate,GammaSpectrum,GammaSpectrum-method energy_calibrate,GammaSpectrum,list-method energy_calibrate,GammaSpectrum,lm-method energy_calibrate,GammaSpectrum,PeakPosition-method energy_calibrate-method has_calibration has_calibration,CalibrationCurve-method has_calibration,GammaSpectra-method has_calibration,GammaSpectrum-method has_energy has_energy,GammaSpectra-method has_energy,GammaSpectrum-method |
An S4 Class to Represent a Collection of Gamma Sectra | .GammaSpectra GammaSpectra-class |
An S4 Class to Represent a Gamma Spectrum | .GammaSpectrum GammaSpectrum-class |
Get or Set Parts of an Object | get get_channels get_channels,GammaSpectra-method get_channels,GammaSpectrum-method get_channels,PeakPosition-method get_channels-method get_counts get_counts,GammaSpectra-method get_counts,GammaSpectrum-method get_counts-method get_energy get_energy,GammaSpectra-method get_energy,GammaSpectrum-method get_energy,PeakPosition-method get_energy-method get_energy_calibration get_energy_calibration,GammaSpectra-method get_energy_calibration,GammaSpectrum-method get_energy_calibration-method get_hash get_hash,GammaSpectra-method get_hash,GammaSpectrum-method get_hash,PeakPosition-method get_hash-method get_livetime get_livetime,GammaSpectra-method get_livetime,GammaSpectrum-method get_livetime-method get_method get_method,Baseline-method get_method-method get_names get_names,GammaSpectra-method get_names,GammaSpectrum-method get_names-method get_rates get_rates,GammaSpectra-method get_rates,GammaSpectrum-method get_rates-method get_realtime get_realtime,GammaSpectra-method get_realtime,GammaSpectrum-method get_realtime-method get_residuals get_residuals,DoseRateModel-method get_residuals-method length,GammaSpectrum-method mutator range_channels range_channels,GammaSpectra-method range_channels,GammaSpectrum-method range_channels-method range_energy range_energy,GammaSpectra-method range_energy,GammaSpectrum-method range_energy-method set set_energy,PeakPosition,numeric-method set_energy-method set_energy<- set_energy<-,PeakPosition,numeric-method set_energy_calibration,GammaSpectra-method set_energy_calibration,GammaSpectrum-method set_energy_calibration-method set_energy_calibration<- set_energy_calibration<-,GammaSpectra-method set_energy_calibration<-,GammaSpectrum-method set_method,Baseline-method set_method-method set_method<- set_method<-,Baseline-method set_name,GammaSpectra-method set_names,GammaSpectrum-method set_names-method set_names<- set_names<-,GammaSpectra-method set_names<-,GammaSpectrum-method |
Common Operations on GammaSpectrum Objects | Arith,GammaSpectrum,GammaSpectrum-method Arith,GammaSpectrum,numeric-method Compare,GammaSpectrum,GammaSpectrum-method Compare,GammaSpectrum,numeric-method Logic,GammaSpectrum,GammaSpectrum-method Logic,GammaSpectrum,logical-method Logic,GammaSpectrum,numeric-method Math,GammaSpectrum-method Math2,GammaSpectrum-method operator Summary,GammaSpectrum-method |
An S4 Class to Represent a Set of Peaks | .PeakPosition PeakPosition-class |
Find Peaks | peaks_find peaks_find,GammaSpectrum-method peaks_find-method |
Search Peaks | peaks_search peaks_search,GammaSpectrum,integer-method peaks_search,GammaSpectrum,numeric-method peaks_search-method |
Plot | plot plot,CalibrationCurve,missing-method plot,GammaSpectra,missing-method plot,GammaSpectrum,Baseline-method plot,GammaSpectrum,missing-method plot,GammaSpectrum,PeakPosition-method plot-method |
Data Input | read read,character-method read-method |
Signal Integration | signal_integrate signal_integrate,GammaSpectra,GammaSpectrum-method signal_integrate,GammaSpectra,missing-method signal_integrate,GammaSpectra,numeric-method signal_integrate,GammaSpectrum,GammaSpectrum-method signal_integrate,GammaSpectrum,missing-method signal_integrate,GammaSpectrum,numeric-method signal_integrate-method |
Choose channels by Position | signal_slice signal_slice,GammaSpectra-method signal_slice,GammaSpectrum-method signal_slice-method |
Split | signal_split signal_split,GammaSpectrum-method signal_split-method |
Transform Intensities | signal_stabilize signal_stabilize,GammaSpectra-method signal_stabilize,GammaSpectrum-method signal_stabilize-method |
Smooth | signal_smooth signal_smooth,GammaSpectra-method signal_smooth,GammaSpectrum-method signal_smooth-method smooth smooth_rectangular smooth_rectangular,GammaSpectra-method smooth_rectangular,GammaSpectrum-method smooth_rectangular-method smooth_savitzky smooth_savitzky,GammaSpectra-method smooth_savitzky,GammaSpectrum-method smooth_savitzky-method smooth_triangular smooth_triangular,GammaSpectra-method smooth_triangular,GammaSpectrum-method smooth_triangular-method |
Extract or Replace Parts of an Object | subset [,GammaSpectra-method [[,CalibrationCurve-method [[,DoseRateModel-method [[,GammaSpectrum-method [[,PeakPosition-method |
Summarize | summarise summarise,CalibrationCurve-method summarise,DoseRateModel-method summarise,GammaSpectra-method summarise,GammaSpectrum-method summarise-method |